Photosynthesis

Definition of Photosynthesis

“Photosynthesis is a process used by plants in which energy from sunlight is used to convert carbon dioxide and water into molecules needed for growth. These molecules include sugars, enzymes and chlorophyll. Light energy is absorbed by the green chemical chlorophyll.”

All animals and human beings are dependent on plants for food and these plants synthesize the food via physio – chemical process called Photosynthesis. This process is important because:


It is the primary source of food.


It results in the release of oxygen in atmosphere.
 



Early experiment for Photosynthesis

In the year 1770, Joseph Priestly performed several experiments that revealed the role of air in growth of green plants. Following figure shows the experiment carried out by Priestly:





Priestly observed that the candle burning in closed space, i.e. a bell jar, extinguishes after some time. As shown in figure (a)and (b) mouse is also fainted after some time. This concluded that both candle and mouse require air, but somehow damaged it. But when the mint plant was placed in the jar, (c) and (d) the candle was burning after some time and mouse also stayed alive. After this experiment, Priestly hypothesized that:

“Plants restore to the air whatever breathing animals and burning candles remove.”

Using the similar set up used by Priestly, Jan Ingenhousz (1730 – 1799) carried out an experiment to show the importance of sunlight to plants, which somehow purifies the air fouled by breathing animals or burning candles. He took aquatic plants into observation and showed that in the presence of bright sunlight, small bubbles were formed around the green parts, while there were not bubbles during night. Later, he concluded that the bubbles were of oxygen and only the green parts are able to release oxygen.

In the year 1854, Julius Von Sachs provided evidence of the production of glucose during the growth of plants. This glucose is stored as starch and later, he concluded that the green substances are located in special bodies within plant cells. He also concluded that glucose is made in the green part of the plant and is stored as Starch.

T.W. Engelmann (1843 – 1909) also carried out an interesting experiment. He used prism and split the light in several components and illuminated green algae, called Cladophora, placed in the suspension of aerobic bacteria. These bacteria helped in detecting the site of evolution of oxygen. During the experiment, he observed that the bacteria accumulated mainly in the region of red and blue light of the split spectrum. This was the first time when photosynthesis was described and it resembled the absorption of spectra of chlorophyll.

By the middle 19th century, the were features about the photosynthesis were known and following empirical equation was introduced that represented the entire process of photosynthesis:



Then, Cornelius van Niel (1897 – 1985) added that photosynthesis is a light dependent reaction in which hydrogen form an oxidisable compound and reduces carbon dioxide to carbohydrates. The entire reaction is represented as follows:



He also concluded that O2 evolved from green plants comes from H2O and not from CO2. This was later proved via radio isotopic techniques. The correct equation that represented the entire photosynthesis process is:



 Where, C6H12O6 is glucose and O2 is released from water.
 

Where Photosynthesis does takes place?

Photosynthesis includes series of chemical reactions which are carried out in chloroplast,i.e.The specialized structures found on cells of plants. In these series of reaction, water and carbon dioxide are converted into glucose and in this reaction energy from sunlight is used. Because, it is an endothermic reaction, the entire process requires input of energy. Photosynthesis is also classified as oxidation – reduction reaction as it includes loss of electrons by water and gain of electrons by carbon dioxide.

The process of photosynthesis takes place in Mesophyll Cells and the carbon dioxide required by the process enters the process via stomata, i.e. the small holes present on the outer layer of leaves. The water required for the process is transported via roots through the vascular tissues.

The chloroplast contains membranous system (shown in image below) consisting of the stroma lamellae, grana and the fluid stroma. The membrane system traps the light energy and helps in synthesizing ATP and NADPH. Following diagram shows the electron micrograph of a section of chloroplast:





Structure of Mesophyll Cells

Following figure shows the structure of Mesophyll Cells. It includes outer cell wall, cell membrane, cytoplasm, chloroplast, vacuole and nucleus. 


 

Role of different Part of Mesophyll Cells:


Cell Wall – It provides mechanical and structural support, determine and maintain the shape of cell, protect cells against pathogens and control the direction of growth.


Cytoplasm – It is the platform of different chemical processes and is controlled by enzymes.


Cell Membrane – It acts as a barrier and helps in controlling the movement of substances in and out of cell.


Chloroplasts – It contains chlorophyll and green substance that absorb light energy.


Vacuole – It holds moisture and keeps the plant turgid.


Nucleus – It contains DNA and controls the activities of cell.
 



How many pigments are involved in Photosynthesis?

“Pigments are the substances that possess the ability to absorb light at specific wavelength.” Leaves of plants have four types of pigments, i.e. Chlorophyll a (bright or blue green in chromatogram), Chlorophyll b (yellow green), Carotenoids (yellow to yellow – orange) and Xanthophylls (yellow). Photosynthesis takes place in red and blue regions of spectrum and some photosynthesis also takes place at other wavelengths. Chlorophyll is the major pigment that traps the light energy and other pigments are referred as accessory pigment which traps light and transfer the energy to chlorophyll a.
 

Types of Photosynthetic Reactions

Photosynthetic Reactions are of two types, i.e.


Light Dependent Reaction – In these reactions, the energy from sunlight is absorbed by chlorophyll and transformed into chemical energy in the form of ATP and NADPH (electron carrier molecule).


Light Independent Reaction – This reaction is also referred as Calvin Cycle. In this reaction, the energized electron from light dependent reactions provides energy to form carbohydrates from CO2 molecules.
 



What is Light Reaction?

Light Reaction is also called Photochemical Phase. It includes absorption of light, splitting of water, oxygen release followed by release of high energy chemical intermediates, NADPH and ATP. The pigments in light reaction are organized in light harvesting complexes (LHC) within PSI and PSII (Photosystem 1 and Photosystem 2). Both these photo chemicals are named in the sequence of discovery. LHC is formed from hundreds of pigment molecules bound to proteins (except chlorophyll a) forming a light harvest system called Antennae. These pigments make the process of photosynthesis more efficient. The single molecule of chlorophyll a form the Reaction Center and this center are different in both photosystems first and second. The following diagram shows the light harvesting complex:



The Electron Transport

In PS II, the reaction center chlorophyll a absorbs 680 nm wavelengths of light (Refer the figure below for each step). This result the electrons to be excited and jump in an orbit. These electrons are captured by electron acceptor which passed to electron transport system of cytochromes. These electrons are not used as they pass through the entire electron transport chain but are passed onto the pigment of PS I. At the same time, electrons at PS I reaction center are also excited when they receive red light of wavelength 700 nm. These electrons are transferred to another acceptor molecule with greater redox potential. In this electron transport chain, electrons are not used rather they are passed to the pigments of b. At the same time, electrons present in reaction center of PS I also gets excited after receiving red light of wavelength 700 nm. Then, these electrons are transferred to another acceptor molecule with greater redox potential. These electrons, then move downhill and this time to energy rich molecule i.e. NADP+, whose addition reduces NADP+ to NADPH + H+.

This entire scheme of transfer of electrons starting from PS II to uphill then down the electron chain to PS I, excitation of electrons, transferring to another acceptor and ultimately downhill to NADP+ resulting in formation of NADPH + H+ is referred as Z Scheme. Following diagram shows the entire process of Electron Transport in detail, as discussed above:



Cyclic and Non – Cyclic Photo – Phosphorylation

In bacterial photosynthesis, a single PS (Photo System) is involved. When an electron is energized by absorption of light, it is ejected from the PS reaction center. This electron then passes through an electron transport system and finally back to reaction center. “The energy released during the electron transport is used to produce ATP. Since the excited electron returns to the reaction center, this mechanism of making b is called Cyclic Photophosphorylation.”

Following diagram shows the above explained process of cyclic photophosphorylation. No reducing power, required for biosynthesis is generated in this process. In this process, the energy released during the electron transport is used to produce ATP and the excited electron returns to the reaction center:



Cyanobacteria and Plants use two PS which simultaneously work to produce energy and reduce power. Primarily, a photon of light ejects a high energy light from PS II. This electron travels from excited reaction center of PS II down the chain and enters in PS I. “This electron transport system generates a proton motive force that is used to produce ATP. Since the excited electron does not return to PS II, this mechanism for making ATP is called Non – Cyclic Photophosphorylation.” When PS I absorb a photon of light, it releases high energy electron that is used to drive the formation of reducing power in the form of NADPH. This ejected electron is replaced by an electron of PS II.

The following diagram shows the entire process of noncyclic photophosphorylation as discussed above. In this process the excited electron does not return to PS II and therefore, this entire mechanism for making ATP is referred as Non – Cyclic Photophosphorylation:



Chemiosmotic Hypothesis

“The chemiosmotic hypothesis suggests that the action of ATP synthase is coupled with that of a proton gradient. It is the action of the proton gradient that causes a proton motive force that allows ATP synthase to phosphorylate ADP and inorganic phosphate to ATP.”

Peter Mitchell in the year 1961 postulated this hypothesis which explains the mechanism of synthesis of ATP during photosynthesis, in chloroplast. During light reaction or photochemical phase, ATP and NADP are generated and these are the key components used in dark reaction for production of sugar molecule. According to chemiosmotic hypothesis, ATP production is the outcome of photon gradient across the membrane of thylakoids. The essential components required in this process are proton gradient, proton pump and ATP synthase (enzyme that helps ATP synthesis).

Following diagram explains the entire process included in chemiosmotic hypothesis. In this process, protons are pumped across the membrane as electron flows through the respiratory chain: 



Importance of Proton Gradient

The Proton Gradient is important in this process because it is the breakdown of this gradient result in release of energy. This gradient is broken down due to the movement of proton across membrane via transmembrane channel of Fo of ATPase. This ATPase comprise of Fo and F1, whereby Fo is embedded in membrane and forms transmembrane channel and protrudes F1on outer membrane of thylakoid membrane.
 

Where are the ATP and NADPH used?

We are aware of the products of light reaction, i.e. ATP, NADPH and O2. Amongst these O2 diffuses out of chloroplast and ATPand NADPH helps in driving the process leading to food synthesis and forming sugars. It is also referred as biosynthetic phase of photosynthesis and this process does not depend on the presence of light, rather it depends on the product of light reaction. It is carried out in stroma of chloroplast.

Definition of Biosynthetic Phase

“Biosynthetic Phase is the process by which carbon dioxide is reduced to carbohydrates and the process is termed as carbon fixation; it makes use of the ATP and NADPH produced in the light phase. This process occurs in the stroma of chloroplasts with the help of series of enzyme-catalysed reactions.”
 

How ATP and NADPH are used in Biosynthetic Phase?

We are aware of the fact that CO2 is combined with H2O to produce sugar. Scientist were very eager to find out how this reaction proceeded and just after Second World War, the use of radioisotope 14C led to the discovery that the first CO2fixation product was 3 – Carbon Organic Acid. Melvin Calvin contributed in answering this and therefore, the complete biosynthetic pathway is named as Calvin Cycle. The first identified product was PGA, i.e. 3 – Phosphoglyeric Acid.

Scientist also worked hard to understand if all plants have PGA as a first product of CO2 fixation, or some other product is found in plants. In this direction, several experiments were carried out and it resulted in the discovery of another group of plants, where the first stable product was organic acid. This acid was identified as Oxaloacetic Acid (OAA). Thus, assimilation of CO2 during photosynthesis is carried out in two main ways:


The C3 pathway


The C4 pathway
 



The Calvin Cycle

In Calvin Cycle, Carbon atoms from CO2 are fixed and are used to form three – Carbon Sugar. This process is dependent on ATP and NADPH formed from light reactions. The light reaction is carried out in thylakoid membrane while the Calvin Cycle takes place in stroma. The Calvin cycle can be described in three stages:


Carboxylation – It is the fixation of CO2 in stable organic intermediate. It is an important stage in Calvin Cycle where CO2 is utilized for carboxylation of RuBP in the presence of enzyme RuBP carboxylase. It results in the formation of 2 molecules of 3-PGA. RuBP carboxylase also helps in oxygenation activity and is therefore also referred as RuBP carboxylase – oxygenase (RuBisCO).


Reduction – This stage includes series of reactions that result in the formation of glucose. This step utilizes 2 molecules of ATP (for phosphorylation) and two molecules of NADPH (for reduction per CO2 molecule). The fixation of 6 molecules of CO2 and 6 turns of cycle result in the removal of 1 molecule of glucose from pathway.


Regeneration – This stage includes regeneration of CO2 acceptor molecule and requires 1 ATP for phosphorylation to form RuBP.



Following diagram represents the entire Calvin cycle, as discussed above in detail. The cycle starts with carboxylation, followed by reduction and then, finally regeneration. The last stage includes regeneration of CO2 acceptor molecule and requires 1 ATP for phosphorylation to form RuBP:

  

Reactions in Calvin Cycle

With reference to the above diagram, the reactions are divided in three different stages:


Carbon Fixation – A CO2 molecule combines with 5 C acceptor molecule and RuBP. This step makes 6 Carbon compound that splits into 2 molecules of 3 Carbon compound and 3PGA. The reaction is catalyzed by RuBP carboxylase or oxygenase.


Reduction – At the second stage, ATP and NADPH are converted to 3 PGA molecules into molecules of a three carbon sugar and G3P (glyceraldehyde–3–phosphate).


Regeneration – At the final stage, 3GP molecules go to make glucose while other may be recycled to regenerate RuBP acceptor. The process of regeneration requires ATP along with complex network of reactions.



For exiting cycle, three CO2 molecules enter the cycle for exiting 3GP molecule. This provides three new atoms of fixed carbon. Entering of 3CO2 molecules, results in regeneration of 3 molecules of RuBP acceptor.
 

The C4 Pathway

Plants that carry out C4 pathways comprise of specific enzyme that are located in two different cell types, i.e. Mesophyll Cells and Bundle – Sheath Cells. This pathway is the method that is used by plants to convert atmospheric carbon dioxide in chemical compound containing four carbons. This pathway is used by the plants in subtropical areas such as Sugar Cane, Maize, Millet, Papyrus and Sorghum. These plants are special and have several type of leaf anatomy, i.e. they can tolerate higher temperature and also show response to high light intensity.

This pathway is cyclic in nature. The primary CO2 acceptor is 3-Carbon Molecule PEP (phosphoenol pyruvate) and is present in mesophyll cells. PEPcase or PEP carboxylase is the enzyme that is responsible for this fixation. It is important to note that the mesophyll cells do not have RuBisCO enzyme and C4 acid OAA is formed within cells.

After this, 4 - carbon compounds like aspartic acid or malic acid are formed in mesophyll cells which are then transported to bundle sheath cells, where C4 acids are broken down to release Carbon Dioxide (CO2) and three carbon molecules. These 3 Carbon molecules are transported back to mesophyll cells where it gets converted in PEP, thereby completing the cycle. The CO2 released enters in bundle sheath cells and thereby the Calvin pathway. These bundle sheath cells have surplus of an enzyme called RuBisCO (Ribulose Biphosphate Carboxylase – Oxygenase) and is deficient in PEPcase. Following diagram explains the entire C4 pathway as discussed above:



Photorespiration

Definition of Photorespiration

Photorespiration is a biochemical process in plants in which, especially under conditions of water stress, oxygen inhibits the Calvin cycle, the carbon fixation portion of photosynthesis.

Photorespiration results in light dependent uptake of O2 and release of CO2 and is associated with metabolism and synthesis of small molecule named glycolate. This process simultaneously takes place in green plants along with photosynthesis. Its end result decreases the net amount of CO2 and both photosynthesis and photorespiration works opposite to each other.
 

Factors affecting Photorespiration

The rate of photorespiration increases at any time when the level of carbon dioxide is low and oxygen is high. Such condition occurs when stomata remain partially closed or completely closed and photosynthesis is underway.

Majority of time, the stomata of plants are open, resulting in lowering down the rate of photorespiration. But when plants become water stressed, they close stomata to prevent loss of water via transpiration. Thus, on the other hand, restricts the normal exchange of gases. The level of CO2 gradually rises as water splits during light reaction.

In desert and dry tropical areas, photorespiration is reduced due to water stress and this on the other hand, results in lowering down the potential of plant growth. Some plants have adapted to this problem by modifying the way they carry out photosynthesis. One of the common adaptations is called C2 Metabolism in which plants develop different leaf anatomy called Kranz Anatomy.
 

Factors affecting Photosynthesis

There are several factors that affect the rate of photosynthesis. These factors are both internal and external factors:

Temperature – When carbon dioxide, light and other factors are not limiting, photosynthesis rate increases with the rise in temperature. The most preferred range of temperature is 6° C – 37° C. High temperature results in inactivation of enzymes and thereby affects enzymatically controlled dark reactions.
Carbon Dioxide Concentration – It is the major limiting factor and its concentration is very low in atmosphere, i.e. 0.03 – 0.04%. Increase in concentration to 0.05% causes increase in fixation rate of CO2. Added to this, the C3 and C4 plants differently respond to the concentration of carbon dioxide. “The fact that C3 plants respond to higher CO2 concentration by showing increased rate of photosynthesis leading to higher productivity has been used for some greenhouse crops like bell pepper and tomatoes.” Such plants are allowed to grow in CO2 enriched environment that leads to higher yields.
Light – The light varies as per quality, duration and intensity and has significant impact on the rate of photosynthesis. For instance, there is a linear relationship between incident light and CO2 fixation at low light intensities. Added to this, increase in the incident light beyond point causes breakdown of chlorophyll and decrease in photosynthesis.
Oxygen – Oxygen inhibits photosynthesis in C3 plants but C4 plants show little effect. This is so because C4 plants carry out photorespiration and high oxygen stimulates it. The rate of photosynthesis increases with the reduction of concentration of oxygen.
Water – It is an essential raw material for the assimilation of carbon. Less than one percent of absorbed water is utilized in photosynthesis. The decrease of water content in soil decreases the rate of photosynthesis as well. This is so because it results in dehydration of protoplasm and also results in stomatal closure. Added to this, it impairs enzymatic efficiency, affects its colloidal state, inhibits respiration, etc.
Mineral elements – These are also essential for the growth of plants and it includes Cu, Cl, Mg, Fe, P and these are closely related with the process of photosynthesis.
Air pollutants – Metallic and gaseous pollutants reduce photosynthesis. The pollutants include SO2, oxidants, ozone and hydrogen fluorides.
Chemical compounds – Although, chemical compounds are present in very less quantity but even the small quantity depresses the rate of photosynthesis. On contrary, increase in the presence of chemical compound results in dying of cells.


Thus, there are several factors that affect the rate of photosynthesis. Other factors include content of chlorophyll, protoplasmic factor, accumulation of carbohydrates, etc.